BrainSeq_Phase1

code from brainseq phase 1 paper

Name		Name	Last commit message	Last commit date
caseControl		caseControl
descriptive		descriptive
devel		devel
eqtl		eqtl
revision		revision
trackHub		trackHub
transcript		transcript
LIBD_szControl_n495.mds		LIBD_szControl_n495.mds
LICENSE		LICENSE
README.md		README.md
compare_junctions.R		compare_junctions.R
count_junctions_regtool.sh		count_junctions_regtool.sh
counts_junctions.sh		counts_junctions.sh
eqtl_functions.R		eqtl_functions.R
phenotype_annotated_szControlEqtl_DLPFC.rda		phenotype_annotated_szControlEqtl_DLPFC.rda
phenotype_annotated_szControlEqtl_DLPFC_withDBGAP.csv		phenotype_annotated_szControlEqtl_DLPFC_withDBGAP.csv
prep_samples.R		prep_samples.R
preproc_counts.R		preproc_counts.R
preproc_ers.R		preproc_ers.R
run_feature_counts.sh		run_feature_counts.sh
sample_rnums.txt		sample_rnums.txt
szControl_ERs.bed		szControl_ERs.bed

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