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pkgin: pkg_install package is not installed. #70
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Which bootstrap kit was this with? Sorry about that, these kits haven't been updated in a long time so may require a refresh.
bootstrap-trunk-x86_64-20170127.tar.gz in https://pkgsrc.joyent.com/packages/Linux/el7/bootstrap/ and https://pkgsrc.joyent.com/packages/Linux/el6/bootstrap/ all cannot use because of the lost of
pkg_install.Hm, I tried to reproduce but it works fine for me. Can you confirm what commands you executed and whether
/usr/pkg/.pkgdb/pkg_install-20160410nb1exists after you unpack the tarball (and that there were no errors after unpacking)?For example on an EL7 test host:
$ cat /etc/redhat-release CentOS Linux release 7.3.1611 (Core) $ curl -O https://pkgsrc.joyent.com/packages/Linux/el7/bootstrap/bootstrap-trunk-x86_64-20170127.tar.gz $ tar -zxpf bootstrap-trunk-x86_64-20170127.tar.gz -C / $ PATH=/usr/pkg/sbin:/usr/pkg/bin:$PATH $ pkgin up reading local summary... processing local summary... pkg_summary.xz 100% 2015KB 335.8KB/s 350.8KB/s 00:06 $ pkgin avail | wc -l 16497Thanks.
@jperkin Really thanks your quick reply.
First,
[wangshx@HPC-login ~]$ curl -O https://pkgsrc.joyent.com/packages/Linux/el6/bootstrap/bootstrap-trunk-x86_64-20170127.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 34.2M 100 34.2M 0 0 2640k 0 0:00:13 0:00:13 --:--:-- 5024k [wangshx@HPC-login ~]$ tar -zxpf bootstrap-trunk-x86_64-20170127.tar.gz -C $HOME # No error occur when unpacking
Second,
# I am not a root user [wangshx@HPC-login ~]$ export PATH=$HOME/usr/pkg/sbin:$HOME/usr/pkg/bin:$PATH
Then,
[wangshx@HPC-login ~]$ pkgin up pkgin: error while loading shared libraries: libbz2.so.0: cannot open shared object file: No such file or directory
I encounter this problem before, I fix it using
export LD_LIBRARY_PATH=$HOME/usr/pkg/lib:$LID_LIBRARY_PATH
Last, I check following commands and files you mentioned.
[wangshx@HPC-login ~]$ pkgin up pkgin: pkg_install package is not installed. [wangshx@HPC-login ~]$ cd usr/pkg/ [wangshx@HPC-login pkg]$ ls -al total 56 drwxr-xr-x 14 wangshx liuxs 4096 Jan 28 2017 . drwxr-xr-x 3 wangshx liuxs 4096 Jan 19 00:10 .. drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 bin drwxr-xr-x 6 wangshx liuxs 4096 Jan 28 2017 etc drwxr-xr-x 6 wangshx liuxs 4096 Jan 28 2017 include drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 info drwxr-xr-x 5 wangshx liuxs 4096 Jan 28 2017 lib drwxr-xr-x 3 wangshx liuxs 4096 Jan 28 2017 libdata drwxr-xr-x 3 wangshx liuxs 4096 Jan 27 2017 libexec drwxr-xr-x 7 wangshx liuxs 4096 Jan 28 2017 man drwxr-xr-x 19 wangshx liuxs 4096 Jan 28 2017 .pkgdb drwxr-xr-x 4 wangshx liuxs 4096 Jan 28 2017 .pkgdb.refcount drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 sbin drwxr-xr-x 11 wangshx liuxs 4096 Jan 28 2017 share [wangshx@HPC-login pkg]$ cd .pkgdb [wangshx@HPC-login .pkgdb]$ ls -al total 996 drwxr-xr-x 19 wangshx liuxs 4096 Jan 28 2017 . drwxr-xr-x 14 wangshx liuxs 4096 Jan 28 2017 .. drwxr-xr-x 2 wangshx liuxs 4096 Jan 27 2017 bmake-20150505 drwxr-xr-x 2 wangshx liuxs 4096 Jan 27 2017 bootstrap-mk-files-20160908 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 bzip2-1.0.6nb1 drwxr-xr-x 2 wangshx liuxs 4096 Jan 27 2017 cwrappers-20170112 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 libarchive-3.2.1nb2 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 mozilla-rootcerts-1.0.20160610 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 ncurses-6.0nb3 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 openssl-1.0.2k drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 perl-5.24.0 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 pkg_alternatives-1.6 -rw-r--r-- 1 wangshx liuxs 942080 Jan 28 2017 pkgdb.byfile.db drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 pkgin-0.9.4nb4 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 pkg_install-20160410nb1 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 pkgsrc-gnupg-keys-20160519 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 readline-7.0 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 sqlite3-3.16.2 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 xz-5.2.3 drwxr-xr-x 2 wangshx liuxs 4096 Jan 28 2017 zlib-1.2.8nb3 [wangshx@HPC-login .pkgdb]$ cd pkg_install-20160410nb1/ [wangshx@HPC-login pkg_install-20160410nb1]$ ls +BUILD_INFO +COMMENT +DEINSTALL +DISPLAY +PRESERVE +SIZE_ALL +BUILD_VERSION +CONTENTS +DESC +INSTALL +REQUIRED_BY +SIZE_PKG [wangshx@HPC-login pkg_install-20160410nb1]$ pkgin avail | wc -l pkgin: pkg_install package is not installed. 0
So, still the same error.
How to interpret this? I am really curious and still have no clue to fix it.
You can't install this kit to your home directory, it's built specifically to go into
/usr/pkg. You'll need to build your own pkgsrc packages rather than use ours I'm afraid.The basic approach to doing that is:
$ git clone [email protected]:NetBSD/pkgsrc.git $ cd pkgsrc/bootstrap $ ./bootstrap --prefix=$HOME/pkg $ PATH=$HOME/pkg/sbin:$HOME/pkg/bin:$PATH $ cd ../category/pkg; bmake installwhere
category/pkgis whatever package you wish to install.Reacted by Shixiang Wang (王诗翔)I figure it out. Thanks @jperkin
Hello @jperkin Here I have another question.
I install git but it's still the older version[wangshx@HPC-login etc]$ pkgin -y install git calculating dependencies... done. /usr/pkg/lib/libz.so.1, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libunistring.so.2, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libssl.so.1.0.0, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libssh2.so.1, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libsasl2.so.3, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libpcre2-8.so.0, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libldap-2.4.so.2, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/liblber-2.4.so.2, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libidn2.so.0, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libexpat.so.1, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libcurl.so.4, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libcrypto.so.1.0.0, needed by git-base-2.15.1nb1 is not present in this system. /usr/pkg/lib/libz.so.1, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libxcb.so.1, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libtcl86.so, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libpng16.so.16, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libfreetype.so.6, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libfontconfig.so.1, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libexpat.so.1, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libbz2.so.0, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libXrender.so.1, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libXft.so.2, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libXdmcp.so.6, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libXau.so.6, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libX11.so.6, needed by tk-8.6.7 is not present in this system. /usr/pkg/lib/libz.so.1, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libunistring.so.2, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libssl.so.1.0.0, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libssh2.so.1, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libsasl2.so.3, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libldap-2.4.so.2, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/liblber-2.4.so.2, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libidn2.so.0, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libcrypto.so.1.0.0, needed by curl-7.57.0nb1 is not present in this system. /usr/pkg/lib/libz.so.1, needed by pcre2-10.30nb1 is not present in this system. /usr/pkg/lib/libbz2.so.0, needed by pcre2-10.30nb1 is not present in this system. /usr/pkg/lib/libunistring.so.2, needed by libidn2-2.0.4 is not present in this system. /usr/pkg/lib/libz.so.1, needed by libssh2-1.8.0 is not present in this system. /usr/pkg/lib/libssl.so.1.0.0, needed by libssh2-1.8.0 is not present in this system. /usr/pkg/lib/libcrypto.so.1.0.0, needed by libssh2-1.8.0 is not present in this system. /usr/pkg/lib/libssl.so.1.0.0, needed by openldap-client-2.4.45 is not present in this system. /usr/pkg/lib/libsasl2.so.3, needed by openldap-client-2.4.45 is not present in this system. /usr/pkg/lib/libcrypto.so.1.0.0, needed by openldap-client-2.4.45 is not present in this system. /usr/pkg/lib/libxcb.so.1, needed by libX11-1.6.5 is not present in this system. /usr/pkg/lib/libXdmcp.so.6, needed by libX11-1.6.5 is not present in this system. /usr/pkg/lib/libXau.so.6, needed by libX11-1.6.5 is not present in this system. /usr/pkg/lib/libxcb.so.1, needed by libXext-1.3.3 is not present in this system. /usr/pkg/lib/libXdmcp.so.6, needed by libXext-1.3.3 is not present in this system. /usr/pkg/lib/libXau.so.6, needed by libXext-1.3.3 is not present in this system. /usr/pkg/lib/libX11.so.6, needed by libXext-1.3.3 is not present in this system. /usr/pkg/lib/libz.so.1, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libxcb.so.1, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libpng16.so.16, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libfreetype.so.6, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libfontconfig.so.1, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libexpat.so.1, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libbz2.so.0, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libXrender.so.1, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libXdmcp.so.6, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libXau.so.6, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libX11.so.6, needed by libXft-2.3.2 is not present in this system. /usr/pkg/lib/libz.so.1, needed by tcl-8.6.7nb2 is not present in this system. /usr/pkg/lib/libsqlite3.so.0, needed by tcl-8.6.7nb2 is not present in this system. /usr/pkg/lib/libz.so.1, needed by fontconfig-2.12.6nb1 is not present in this system. /usr/pkg/lib/libpng16.so.16, needed by fontconfig-2.12.6nb1 is not present in this system. /usr/pkg/lib/libfreetype.so.6, needed by fontconfig-2.12.6nb1 is not present in this system. /usr/pkg/lib/libexpat.so.1, needed by fontconfig-2.12.6nb1 is not present in this system. /usr/pkg/lib/libbz2.so.0, needed by fontconfig-2.12.6nb1 is not present in this system. /usr/pkg/lib/libz.so.1, needed by freetype2-2.8.1 is not present in this system. /usr/pkg/lib/libpng16.so.16, needed by freetype2-2.8.1 is not present in this system. /usr/pkg/lib/libbz2.so.0, needed by freetype2-2.8.1 is not present in this system. /usr/pkg/lib/libxcb.so.1, needed by libXrender-0.9.10 is not present in this system. /usr/pkg/lib/libXdmcp.so.6, needed by libXrender-0.9.10 is not present in this system. /usr/pkg/lib/libXau.so.6, needed by libXrender-0.9.10 is not present in this system. /usr/pkg/lib/libX11.so.6, needed by libXrender-0.9.10 is not present in this system. /usr/pkg/lib/libXdmcp.so.6, needed by libxcb-1.12nb1 is not present in this system. /usr/pkg/lib/libXau.so.6, needed by libxcb-1.12nb1 is not present in this system. /usr/pkg/lib/libdb4-4.8.so.8, needed by cyrus-sasl-2.1.26nb6 is not present in this system. /usr/pkg/lib/libssl.so.1.0.0, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libsqlite3.so.0, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libsasl2.so.3, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libreadline.so.7, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libncurses.so.6, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libldap-2.4.so.2, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/liblber-2.4.so.2, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libfl.so.2, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libdb4-4.8.so.8, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libcrypto.so.1.0.0, needed by heimdal-1.5.3nb16 is not present in this system. /usr/pkg/lib/libz.so.1, needed by png-1.6.34 is not present in this system. nothing to upgrade. 34 packages to be installed (66M to download, 546M to install): ncurses-6.0nb4 flex-2.6.4 libidn-1.33 p5-Net-SSLeay-1.82 p5-Net-LibIDN-0.12nb9 p5-Mozilla-CA-20160104nb2 p5-Socket6-0.28nb1 p5-Net-IP-1.26nb5 p5-IO-Socket-INET6-2.72nb3 libunistring-0.9.8 tcp_wrappers-7.6.4 libXdmcp-1.1.2 libXau-1.0.8 p5-GSSAPI-0.28nb8 p5-Digest-HMAC-1.03nb7 p5-Net-Domain-TLD-1.75nb1 p5-Net-DNS-1.14 p5-IO-CaptureOutput-1.11.04nb3 p5-TimeDate-2.30nb4 p5-IO-Socket-SSL-2.052 bzip2-1.0.6nb1 zlib-1.2.11 perl-5.26.1nb2 p5-Net-SMTP-SSL-1.04nb1 p5-MailTools-2.19 p5-Error-0.17025 p5-Email-Valid-1.202nb1 p5-Authen-SASL-2.16nb5 openssl-1.0.2nnb1 expat-2.2.4 git-gitk-2.15.1 git-docs-2.15.1 git-contrib-2.15.1 git-2.15.1 the following packages have unmet requirements: git-base-2.15.1nb1 tk-8.6.7 curl-7.57.0nb1 pcre2-10.30nb1 libidn2-2.0.4 libssh2-1.8.0 openldap-client-2.4.45 libX11-1.6.5 libXext-1.3.3 libXft-2.3.2 tcl-8.6.7nb2 fontconfig-2.12.6nb1 freetype2-2.8.1 libXrender-0.9.10 libxcb-1.12nb1 cyrus-sasl-2.1.26nb6 heimdal-1.5.3nb16 png-1.6.34 downloading packages... ncurses-6.0nb4.tgz 100% 1518KB 379.4KB/s 305.5KB/s 00:04 flex-2.6.4.tgz 100% 330KB 164.8KB/s 77.5KB/s 00:02 libidn-1.33.tgz 100% 306KB 152.9KB/s 85.7KB/s 00:02 p5-Net-SSLeay-1.82.tgz 100% 370KB 123.5KB/s 54.4KB/s 00:03 p5-Net-LibIDN-0.12nb9.tgz 100% 25KB 24.6KB/s 24.6KB/s 00:00 p5-Mozilla-CA-20160104nb2.tgz 100% 157KB 156.7KB/s 96.7KB/s 00:01 p5-Socket6-0.28nb1.tgz 100% 23KB 23.4KB/s 23.4KB/s 00:00 p5-Net-IP-1.26nb5.tgz 100% 32KB 31.7KB/s 31.7KB/s 00:00 p5-IO-Socket-INET6-2.72nb3.tgz 100% 16KB 16.0KB/s 16.0KB/s 00:00 libunistring-0.9.8.tgz 100% 1454KB 363.4KB/s 417.6KB/s 00:04 tcp_wrappers-7.6.4.tgz 100% 95KB 95.4KB/s 35.4KB/s 00:01 libXdmcp-1.1.2.tgz 100% 37KB 37.4KB/s 37.4KB/s 00:00 libXau-1.0.8.tgz 100% 17KB 17.0KB/s 17.0KB/s 00:00 p5-GSSAPI-0.28nb8.tgz 100% 59KB 59.3KB/s 15.3KB/s 00:01 p5-Digest-HMAC-1.03nb7.tgz 100% 12KB 12.0KB/s 12.0KB/s 00:00 p5-Net-Domain-TLD-1.75nb1.tgz 100% 34KB 34.1KB/s 34.1KB/s 00:01 p5-Net-DNS-1.14.tgz 100% 347KB 115.7KB/s 143.2KB/s 00:03 p5-IO-CaptureOutput-1.11.04nb3.tgz 100% 15KB 14.6KB/s 14.6KB/s 00:00 p5-TimeDate-2.30nb4.tgz 100% 40KB 39.9KB/s 39.9KB/s 00:01 p5-IO-Socket-SSL-2.052.tgz 100% 176KB 88.1KB/s 116.1KB/s 00:02 bzip2-1.0.6nb1.tgz 100% 94KB 94.2KB/s 34.2KB/s 00:01 zlib-1.2.11.tgz 100% 130KB 130.5KB/s 70.5KB/s 00:01 perl-5.26.1nb2.tgz 100% 18MB 1.5MB/s 362.1KB/s 00:12 p5-Net-SMTP-SSL-1.04nb1.tgz 100% 8366 8.2KB/s 8.2KB/s 00:00 p5-MailTools-2.19.tgz 100% 83KB 82.8KB/s 22.8KB/s 00:01 p5-Error-0.17025.tgz 100% 23KB 22.9KB/s 22.9KB/s 00:00 p5-Email-Valid-1.202nb1.tgz 100% 18KB 18.1KB/s 18.1KB/s 00:00 p5-Authen-SASL-2.16nb5.tgz 100% 45KB 45.2KB/s 45.2KB/s 00:01 openssl-1.0.2nnb1.tgz 100% 4726KB 787.6KB/s 409.7KB/s 00:06 expat-2.2.4.tgz 100% 201KB 201.4KB/s 125.4KB/s 00:01 git-gitk-2.15.1.tgz 100% 465KB 232.5KB/s 229.0KB/s 00:02 git-docs-2.15.1.tgz 100% 812KB 202.9KB/s 383.7KB/s 00:04 git-contrib-2.15.1.tgz 100% 19KB 18.6KB/s 18.6KB/s 00:00 git-2.15.1.tgz 100% 2636 2.6KB/s 2.6KB/s 00:00 installing packages... installing ncurses-6.0nb4... installing flex-2.6.4... installing libidn-1.33... installing p5-Net-SSLeay-1.82... installing p5-Net-LibIDN-0.12nb9... installing p5-Mozilla-CA-20160104nb2... installing p5-Socket6-0.28nb1... installing p5-Net-IP-1.26nb5... installing p5-IO-Socket-INET6-2.72nb3... installing libunistring-0.9.8... installing tcp_wrappers-7.6.4... installing libXdmcp-1.1.2... installing libXau-1.0.8... installing p5-GSSAPI-0.28nb8... installing p5-Digest-HMAC-1.03nb7... installing p5-Net-Domain-TLD-1.75nb1... installing p5-Net-DNS-1.14... installing p5-IO-CaptureOutput-1.11.04nb3... installing p5-TimeDate-2.30nb4... installing p5-IO-Socket-SSL-2.052... installing bzip2-1.0.6nb1... installing zlib-1.2.11... installing perl-5.26.1nb2... installing p5-Net-SMTP-SSL-1.04nb1... installing p5-MailTools-2.19... installing p5-Error-0.17025... installing p5-Email-Valid-1.202nb1... installing p5-Authen-SASL-2.16nb5... installing openssl-1.0.2nnb1... installing expat-2.2.4... installing git-gitk-2.15.1... installing git-docs-2.15.1... installing git-contrib-2.15.1... installing git-2.15.1... pkg_install warnings: 0, errors: 0 [wangshx@HPC-login etc]$ git --version git version 1.7.1
By the way, where is the latest repository for packages via FTP and HTTP?
@jperkin You mentioned that "You'll need to build your own pkgsrc packages rather than use ours I'm afraid." It means I cannot use
pkgin installto install packages? I have to usebmake?pkgin only installs pre-built binary packages. However, binary packages are always hardcoded for a predefined prefix, and ours are for /usr/pkg.
If you need packages under a different prefix, you cannot use our binary packages (and subsequently cannot use pkgin); you'll have to close the pkgsrc repository and build your own package from source using bmake.
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I follow the instruction https://pkgsrc.joyent.com/install-on-linux/, but error occur when I use command
[wangshx@HPC-login ~]$ pkgin -y update pkgin: pkg_install package is not installed.I check the directory but I cannot find pkg_install
How can I do to fix it?