Issues

• Support .tcf images

  enhancement
  bioio-devs/bioio#226 · Filter by author BrianWhitneyAI opened on Sep 29, 2026
  

• Support TomoCube TIFF exports

  enhancement
  bioio-devs/bioio#225 · Filter by author BrianWhitneyAI opened on Sep 29, 2026
  

• Allow plugins to opt in to directory detection in determine_plugin

  enhancement
  bioio-devs/bioio#224 · Filter by author BrianWhitneyAI opened on Sep 26, 2026
  

• Add bioio-imagexpress to the reader plug-in registry

  bioio-devs/bioio#222 · Filter by author BrianWhitneyAI opened on Sep 23, 2026
  

• Windowed get_image_data on a stitched mosaic reads the whole mosaic

  bioio-devs/bioio#220 · Filter by author BrianWhitneyAI opened on Sep 14, 2026
  1

  

• Feature Request: add tomocube image reader plugin

  enhancement
  bioio-devs/bioio#212 · Filter by author BrianWhitneyAI opened on Jul 30, 2026
  

• Extract newly defined metadata fields

  bioio-devs/bioio#206 · Filter by author SeanDuHare opened on Jul 10, 2026
  

• Define new/extra metadata to extract

  bioio-devs/bioio#205 · Filter by author SeanDuHare opened on Jul 10, 2026
  1

  

• Upgrade Metadata Extraction

  bioio-devs/bioio#204 · Filter by author SeanDuHare opened on Jul 10, 2026
  1

  

• Exploration: Relax the "always close file handles" policy to improve reader performance

  bioio-devs/bioio#192 · Filter by author BrianWhitneyAI opened on Apr 8, 2026
  2

  

• Feature Request: modernize typing syntax to Python 3.10+ native types

  bioio-devs/bioio#186 · Filter by author BrianWhitneyAI opened on Mar 30, 2026

• Feature Request: add uv support for dependency management

  bioio-devs/bioio#185 · Filter by author BrianWhitneyAI opened on Mar 30, 2026
  2

• Feature Request: migrate build backend from setuptools to hatchling

  bioio-devs/bioio#184 · Filter by author BrianWhitneyAI opened on Mar 30, 2026

• Performance of bioio compared to native readers

  bug
  bioio-devs/bioio#144 · Filter by author frauzufall opened on Jul 4, 2025
  4

• image_name parameter in OmeTiffWriter should be clearly accessible with BioImage

  enhancement
  bioio-devs/bioio#73 · Filter by author TimMonko opened on Sep 5, 2024

• reader chunk_dims are too coarse-grained for dask

  enhancement
  bioio-devs/bioio#33 · Filter by author toloudis opened on Jan 23, 2024