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1. Visualise-scRNAseq-Dmel-OL-expression Visualise-scRNAseq-Dmel-OL-expression Public

   Visualise scRNAseq expression data of developmental Drosophila melanogaster optic lobe

   R 2

2. Gene-expression-AllenBrainAtlas Gene-expression-AllenBrainAtlas Public

   Visualization of Single-cell RNA-seq data from Allen Brain Atlas (https://celltypes.brain-map.org/rnaseq/)

   R 1

3. Automated-branching-analysis Automated-branching-analysis Public

   2D neuron segmentation and classification batch processing tool

   MATLAB

4. Branch-Lifetime-PRG2 Branch-Lifetime-PRG2 Public

   processing and analysis of live-cell imaging data of axon branch precursor type, location and lifetime

   R

5. Branching_fixed Branching_fixed Public

   Branching Analysis of fixed neurons measured via NeuronJ

   R

6. Microscopy_analysis_snippets Microscopy_analysis_snippets Public

   Some code snippets I often use in ImageJ macros

   ImageJ Macro