museomics

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1. metaMuseomics metaMuseomics Public

   Python package for use in metagenomic assembly and analysis of degraded, metagenomic samples common in museum specimen

   Python 2

2. sample-preprocessing sample-preprocessing Public

   From raw genome skim generated from museum specimens to validated barcode and assembled mitogenomes

   Python 1 1

3. seqpy_tools seqpy_tools Public

   Tools for use in metagenomic analyses of historical data

   Python 1

4. its-fun-2-map its-fun-2-map Public

   Pipeline and tools for fungal ITS barcode extraction and validation

   Python 1

5. taxid-minting-process taxid-minting-process Public

   This repository outlines the process of generating taxid creation request (TSV) request forms from hierarchical taxonomy data at scale

   Python 2

6. ena_submission ena_submission Public

   Forked from o-william-white/ena_submission

   Simple python script to write and validate files for ENA upload from outputs of skim2mito and skim2rrna.

   Python 1