NCI Human Tumor Atlas Network (HTAN)
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Showing 10 of 58 repositories
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- htan2-data-release-pipeline Public
This repository contains the data pipeline for HTAN data releases to BigQuery, including data ingestion, validation, transformation using the medallion architecture (raw, bronze, silver, gold), and final release steps.
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- htan-claude Public
- channel-metadata-agent Public
Agentic curation of HTAN imaging channel metadata into a harmonized marker library — prototype, Dec 2025
- mif-explorer Public
Prototype explorer for HTAN multiplexed immunofluorescence (mIF) metadata — Sage Home Week hackathon, autumn 2025
- htan2_project_setup Public
- htan2-to-crdc-nextflow-uploader Public
The pipeline for uploading HTAN2 data to NCI Cancer Research Data Commons (CRDC) via the General Commons (GC).
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